WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C17A2.3.1 Sequence Name  C17A2.3.1
Length (nt)  1047   Chromosome Location  II: 3843609-3845509
Chromosome . Primary Identifier  II Chromosome Location . Start  3843609
Chromosome Location . End  3845509 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C17A2.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015871 C17A2.3 C17A2.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C17A2.3 C17A2.3 1047   II: 3843609-3843772

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C17A2.3.1 3843609 3845509 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon46220   164   II: 3843609-3843772 Caenorhabditis elegans
Exon46221   63   II: 3843819-3843881 Caenorhabditis elegans
Exon46222   430   II: 3844593-3845022 Caenorhabditis elegans
Exon46223   258   II: 3845077-3845334 Caenorhabditis elegans
Exon46224   132   II: 3845378-3845509 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C17A2.3.1 3843609 3845509 1

1 Sequence

Length
1047

1 Sequence Ontology Term

Identifier Name Description
transcript