WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C49D10.8.1 Sequence Name  C49D10.8.1
Length (nt)  1989   Chromosome Location  II: 3858142-3860926
Chromosome . Primary Identifier  II Chromosome Location . Start  3858142
Chromosome Location . End  3860926 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C49D10.8.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016776 oac-11 C49D10.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C49D10.8 C49D10.8 1989   II: 3858142-3858387

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C49D10.8.1 3858142 3860926 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon46257   246   II: 3858142-3858387 Caenorhabditis elegans
Exon46258   211   II: 3858585-3858795 Caenorhabditis elegans
Exon46259   112   II: 3858841-3858952 Caenorhabditis elegans
Exon46260   127   II: 3859002-3859128 Caenorhabditis elegans
Exon46261   332   II: 3859177-3859508 Caenorhabditis elegans
Exon46262   167   II: 3859558-3859724 Caenorhabditis elegans
Exon46263   265   II: 3859769-3860033 Caenorhabditis elegans
Exon46264   139   II: 3860086-3860224 Caenorhabditis elegans
Exon46265   265   II: 3860466-3860730 Caenorhabditis elegans
Exon46266   125   II: 3860802-3860926 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C49D10.8.1 3858142 3860926 -1

1 Sequence

Length
1989

1 Sequence Ontology Term

Identifier Name Description
transcript