WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C49D10.4.1 Sequence Name  C49D10.4.1
Length (nt)  2066   Chromosome Location  II: 3869901-3873063
Chromosome . Primary Identifier  II Chromosome Location . Start  3869901
Chromosome Location . End  3873063 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C49D10.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016773 oac-10 C49D10.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C49D10.4 C49D10.4 2013   II: 3869901-3870007

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C49D10.4.1 3869901 3873063 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon46284   107   II: 3869901-3870007 Caenorhabditis elegans
Exon46285   134   II: 3870049-3870182 Caenorhabditis elegans
Exon46286   128   II: 3870231-3870358 Caenorhabditis elegans
Exon46287   197   II: 3870612-3870808 Caenorhabditis elegans
Exon46288   253   II: 3870860-3871112 Caenorhabditis elegans
Exon46289   71   II: 3871423-3871493 Caenorhabditis elegans
Exon46290   98   II: 3871544-3871641 Caenorhabditis elegans
Exon46291   243   II: 3871688-3871930 Caenorhabditis elegans
Exon46292   234   II: 3872004-3872237 Caenorhabditis elegans
Exon46293   109   II: 3872283-3872391 Caenorhabditis elegans
Exon46294   261   II: 3872452-3872712 Caenorhabditis elegans
Exon46295   231   II: 3872833-3873063 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C49D10.4.1 3869901 3873063 1

1 Sequence

Length
2066

1 Sequence Ontology Term

Identifier Name Description
transcript