WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:K07D4.3 Sequence Name  K07D4.3
Length (nt)  939   Chromosome Location  II: 4043217-4043579
Chromosome . Primary Identifier  II Chromosome Location . Start  4043217
Chromosome Location . End  4043579
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K07D4.3

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE19527 RPN-11 34.6 312 Caenorhabditis elegans
 

Other

21 RNAi

WormBase ID
WBRNAi00096603
WBRNAi00095676
WBRNAi00096622
WBRNAi00108322
WBRNAi00008965
WBRNAi00064994
WBRNAi00090980
WBRNAi00050156
WBRNAi00076553
WBRNAi00034070
WBRNAi00022809
WBRNAi00025906
WBRNAi00114584
WBRNAi00078715
WBRNAi00078749
WBRNAi00078783
WBRNAi00111740
WBRNAi00092754
WBRNAi00112151
WBRNAi00117394
WBRNAi00117396

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:K07D4.3 4043217 4043579 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004467 rpn-11 K07D4.3 Caenorhabditis elegans

4 Locations


Feature . Primary Identifier
Start End Strand
CDS:K07D4.3 4043217 4043579 -1
CDS:K07D4.3 4043638 4043967 -1
CDS:K07D4.3 4044026 4044223 -1
CDS:K07D4.3 4044277 4044324 -1

1 Sequence

Length
939

1 Sequence Ontology Term

Identifier Name Description
CDS  

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:K07D4.3.2 K07D4.3.2 1235   II: 4043055-4044546
Transcript:K07D4.3.1 K07D4.3.1 1100   II: 4043062-4044330