WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:W06A11.2.2 Sequence Name  W06A11.2.2
Length (nt)  3349   Chromosome Location  II: 4058892-4062577
Chromosome . Primary Identifier  II Chromosome Location . Start  4058892
Chromosome Location . End  4062577 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W06A11.2.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021053 gadr-4 W06A11.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W06A11.2 W06A11.2 2394   II: 4058956-4059364

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:W06A11.2.2 4058892 4062577 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon46743   473   II: 4058892-4059364 Caenorhabditis elegans
Exon46747   600   II: 4059418-4060017 Caenorhabditis elegans
Exon46749   268   II: 4060067-4060334 Caenorhabditis elegans
Exon46751   158   II: 4060377-4060534 Caenorhabditis elegans
Exon46753   266   II: 4060584-4060849 Caenorhabditis elegans
Exon46755   122   II: 4060892-4061013 Caenorhabditis elegans
Exon46757   249   II: 4061062-4061310 Caenorhabditis elegans
Exon46759   1213   II: 4061365-4062577 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:W06A11.2.2 4058892 4062577 -1

1 Sequence

Length
3349

1 Sequence Ontology Term

Identifier Name Description
transcript