WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:W06A11.2.1 Sequence Name  W06A11.2.1
Length (nt)  2428   Chromosome Location  II: 4058934-4061698
Chromosome . Primary Identifier  II Chromosome Location . Start  4058934
Chromosome Location . End  4061698 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W06A11.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021053 gadr-4 W06A11.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W06A11.2 W06A11.2 2394   II: 4058956-4059364

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:W06A11.2.1 4058934 4061698 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon46744   431   II: 4058934-4059364 Caenorhabditis elegans
Exon46746   600   II: 4059418-4060017 Caenorhabditis elegans
Exon46748   268   II: 4060067-4060334 Caenorhabditis elegans
Exon46750   158   II: 4060377-4060534 Caenorhabditis elegans
Exon46752   266   II: 4060584-4060849 Caenorhabditis elegans
Exon46754   122   II: 4060892-4061013 Caenorhabditis elegans
Exon46756   249   II: 4061062-4061310 Caenorhabditis elegans
Exon46758   334   II: 4061365-4061698 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:W06A11.2.1 4058934 4061698 -1

1 Sequence

Length
2428

1 Sequence Ontology Term

Identifier Name Description
transcript