WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:W06A11.1.1 Sequence Name  W06A11.1.1
Length (nt)  2312   Chromosome Location  II: 4067558-4072935
Chromosome . Primary Identifier  II Chromosome Location . Start  4067558
Chromosome Location . End  4072935 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W06A11.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021052 W06A11.1 W06A11.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W06A11.1 W06A11.1 1998   II: 4067624-4067672

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:W06A11.1.1 4067558 4072935 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon46764   115   II: 4067558-4067672 Caenorhabditis elegans
Exon46765   159   II: 4068351-4068509 Caenorhabditis elegans
Exon46766   392   II: 4069297-4069688 Caenorhabditis elegans
Exon46767   229   II: 4069868-4070096 Caenorhabditis elegans
Exon46768   144   II: 4070143-4070286 Caenorhabditis elegans
Exon46769   161   II: 4070425-4070585 Caenorhabditis elegans
Exon46770   349   II: 4071158-4071506 Caenorhabditis elegans
Exon46771   68   II: 4071577-4071644 Caenorhabditis elegans
Exon46772   107   II: 4071782-4071888 Caenorhabditis elegans
Exon46773   588   II: 4072348-4072935 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:W06A11.1.1 4067558 4072935 1

1 Sequence

Length
2312

1 Sequence Ontology Term

Identifier Name Description
transcript