WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F31D5.2.1 Sequence Name  F31D5.2.1
Length (nt)  1475   Chromosome Location  II: 4215618-4218241
Chromosome . Primary Identifier  II Chromosome Location . Start  4215618
Chromosome Location . End  4218241 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F31D5.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017945 F31D5.2 F31D5.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F31D5.2 F31D5.2 1413   II: 4215618-4215778

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F31D5.2.1 4215618 4218241 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon47043   161   II: 4215618-4215778 Caenorhabditis elegans
Exon47044   188   II: 4216341-4216528 Caenorhabditis elegans
Exon47045   97   II: 4216715-4216811 Caenorhabditis elegans
Exon47046   76   II: 4216857-4216932 Caenorhabditis elegans
Exon47047   124   II: 4216979-4217102 Caenorhabditis elegans
Exon47048   90   II: 4217155-4217244 Caenorhabditis elegans
Exon47049   271   II: 4217318-4217588 Caenorhabditis elegans
Exon47050   136   II: 4217638-4217773 Caenorhabditis elegans
Exon47051   151   II: 4217825-4217975 Caenorhabditis elegans
Exon47052   181   II: 4218061-4218241 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F31D5.2.1 4215618 4218241 1

1 Sequence

Length
1475

1 Sequence Ontology Term

Identifier Name Description
transcript