WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C16A11.2a Sequence Name  C16A11.2a
Length (nt)  1713   Chromosome Location  II: 4238213-4238242
Chromosome . Primary Identifier  II Chromosome Location . Start  4238213
Chromosome Location . End  4238242
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C16A11.2a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE36978 C16A11.2, isoform a 66.4 570 Caenorhabditis elegans
 

Other

4 RNAi

WormBase ID
WBRNAi00040642
WBRNAi00010809
WBRNAi00093003
WBRNAi00085093

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:C16A11.2a 4238213 4238242 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015815 C16A11.2 C16A11.2 Caenorhabditis elegans

8 Locations


Feature . Primary Identifier
Start End Strand
CDS:C16A11.2a 4238213 4238242 1
CDS:C16A11.2a 4238286 4238384 1
CDS:C16A11.2a 4238435 4238538 1
CDS:C16A11.2a 4239306 4239708 1
CDS:C16A11.2a 4240519 4240811 1
CDS:C16A11.2a 4242151 4242603 1
CDS:C16A11.2a 4243321 4243516 1
CDS:C16A11.2a 4244561 4244695 1

1 Sequence

Length
1713

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C16A11.2a.1 C16A11.2a.1 1858   II: 4238203-4244830