WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C01F1.4 Sequence Name  C01F1.4
Length (nt)  1002   Chromosome Location  II: 4276214-4276483
Chromosome . Primary Identifier  II Chromosome Location . Start  4276214
Chromosome Location . End  4276483
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C01F1.4

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE06745 NPR-42 38.0 333 Caenorhabditis elegans
 

Other

3 RNAi

WormBase ID
WBRNAi00039301
WBRNAi00009915
WBRNAi00028280

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:C01F1.4 4276214 4276483 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015299 npr-42 C01F1.4 Caenorhabditis elegans

5 Locations


Feature . Primary Identifier
Start End Strand
CDS:C01F1.4 4276214 4276483 1
CDS:C01F1.4 4277441 4277643 1
CDS:C01F1.4 4278154 4278283 1
CDS:C01F1.4 4278476 4278729 1
CDS:C01F1.4 4278982 4279126 1

1 Sequence

Length
1002

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C01F1.4.1 C01F1.4.1 1156   II: 4276202-4279268