WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y52E8A.4b Sequence Name  Y52E8A.4b
Length (nt)  1080   Chromosome Location  II: 4309725-4309804
Chromosome . Primary Identifier  II Chromosome Location . Start  4309725
Chromosome Location . End  4309804
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y52E8A.4b

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE50876 PLEP-1, isoform b 39.6 359 Caenorhabditis elegans
 

Other

4 RNAi

WormBase ID
WBRNAi00057235
WBRNAi00106212
WBRNAi00106211
WBRNAi00106210

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y52E8A.4b 4309725 4309804 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021797 plep-1 Y52E8A.4 Caenorhabditis elegans

8 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y52E8A.4b 4309725 4309804 -1
CDS:Y52E8A.4b 4309848 4309992 -1
CDS:Y52E8A.4b 4310059 4310194 -1
CDS:Y52E8A.4b 4310248 4310521 -1
CDS:Y52E8A.4b 4310619 4310708 -1
CDS:Y52E8A.4b 4310758 4310878 -1
CDS:Y52E8A.4b 4310922 4311094 -1
CDS:Y52E8A.4b 4311436 4311496 -1

1 Sequence

Length
1080

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y52E8A.4b.1 Y52E8A.4b.1 1080   II: 4309725-4311496