WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:B0286.2a.1 Sequence Name  B0286.2a.1
Length (nt)  4386   Chromosome Location  II: 4359065-4368281
Chromosome . Primary Identifier  II Chromosome Location . Start  4359065
Chromosome Location . End  4368281 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
B0286.2a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002252 lat-2 B0286.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:B0286.2a B0286.2a 4017   II: 4359082-4359306

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:B0286.2a.1 4359065 4368281 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

18 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon47425   242   II: 4359065-4359306 Caenorhabditis elegans
Exon47426   112   II: 4359765-4359876 Caenorhabditis elegans
Exon47427   156   II: 4359922-4360077 Caenorhabditis elegans
Exon47428   284   II: 4360496-4360779 Caenorhabditis elegans
Exon47429   83   II: 4360834-4360916 Caenorhabditis elegans
Exon47430   113   II: 4361141-4361253 Caenorhabditis elegans
Exon47431   125   II: 4361300-4361424 Caenorhabditis elegans
Exon47432   110   II: 4361485-4361594 Caenorhabditis elegans
Exon47433   198   II: 4361640-4361837 Caenorhabditis elegans
Exon47434   59   II: 4362772-4362830 Caenorhabditis elegans
Exon47435   226   II: 4363227-4363452 Caenorhabditis elegans
Exon47436   326   II: 4363829-4364154 Caenorhabditis elegans
Exon47437   88   II: 4364244-4364331 Caenorhabditis elegans
Exon47438   441   II: 4364703-4365143 Caenorhabditis elegans
Exon47439   78   II: 4365645-4365722 Caenorhabditis elegans
Exon47440   224   II: 4366178-4366401 Caenorhabditis elegans
Exon47442   244   II: 4366715-4366958 Caenorhabditis elegans
Exon47445   1277   II: 4367005-4368281 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:B0286.2a.1 4359065 4368281 1

1 Sequence

Length
4386

1 Sequence Ontology Term

Identifier Name Description
transcript