WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:B0286.3.1 Sequence Name  B0286.3.1
Length (nt)  1404   Chromosome Location  II: 4369625-4372525
Chromosome . Primary Identifier  II Chromosome Location . Start  4369625
Chromosome Location . End  4372525 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
B0286.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015116 paic-1 B0286.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:B0286.3 B0286.3 1272   II: 4369747-4369770

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:B0286.3.1 4369625 4372525 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon47452   146   II: 4369625-4369770 Caenorhabditis elegans
Exon47453   201   II: 4369813-4370013 Caenorhabditis elegans
Exon47454   285   II: 4370058-4370342 Caenorhabditis elegans
Exon47455   177   II: 4370671-4370847 Caenorhabditis elegans
Exon47456   489   II: 4371145-4371633 Caenorhabditis elegans
Exon47460   106   II: 4372420-4372525 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:B0286.3.1 4369625 4372525 -1

1 Sequence

Length
1404

1 Sequence Ontology Term

Identifier Name Description
transcript