WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:B0286.4c Sequence Name  B0286.4c
Length (nt)  954   Chromosome Location  II: 4372946-4373402
Chromosome . Primary Identifier  II Chromosome Location . Start  4372946
Chromosome Location . End  4373402
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
B0286.4c

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE29538 NTL-2, isoform c 34.7 317 Caenorhabditis elegans
 

Other

31 RNAi

WormBase ID
WBRNAi00073876
WBRNAi00073877
WBRNAi00073878
WBRNAi00073871
WBRNAi00073872
WBRNAi00073873
WBRNAi00073874
WBRNAi00073875
WBRNAi00024376
WBRNAi00008290
WBRNAi00072326
WBRNAi00094032
WBRNAi00072327
WBRNAi00072328
WBRNAi00091048
WBRNAi00117614
WBRNAi00117616
WBRNAi00117615
WBRNAi00117618
WBRNAi00117617
WBRNAi00023116
WBRNAi00023628
WBRNAi00117620
WBRNAi00117619
WBRNAi00071128
WBRNAi00038883
WBRNAi00028066
WBRNAi00023018
WBRNAi00023917
WBRNAi00070052

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:B0286.4c 4372946 4373402 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003825 ntl-2 B0286.4 Caenorhabditis elegans

4 Locations


Feature . Primary Identifier
Start End Strand
CDS:B0286.4c 4372946 4373402 -1
CDS:B0286.4c 4373887 4374102 -1
CDS:B0286.4c 4374164 4374317 -1
CDS:B0286.4c 4374368 4374494 -1

1 Sequence

Length
954

1 Sequence Ontology Term

Identifier Name Description
CDS  

9 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:B0286.4c.7 B0286.4c.7 1389   II: 4372739-4375011
Transcript:B0286.4c.3 B0286.4c.3 1680   II: 4372739-4376465
Transcript:B0286.4c.1 B0286.4c.1 1469   II: 4372739-4376458
Transcript:B0286.4c.4 B0286.4c.4 1922   II: 4372739-4376464
Transcript:B0286.4c.9 B0286.4c.9 1313   II: 4372741-4374701
Transcript:B0286.4c.8 B0286.4c.8 1296   II: 4372741-4374704
Transcript:B0286.4c.5 B0286.4c.5 1540   II: 4372741-4375721
Transcript:B0286.4c.2 B0286.4c.2 1618   II: 4372741-4376458
Transcript:B0286.4c.6 B0286.4c.6 1362   II: 4372791-4375350