WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T12C9.3a.1 Sequence Name  T12C9.3a.1
Length (nt)  4722   Chromosome Location  II: 4441103-4453151
Chromosome . Primary Identifier  II Chromosome Location . Start  4441103
Chromosome Location . End  4453151 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T12C9.3a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006657 twk-2 T12C9.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T12C9.3a T12C9.3a 4560   II: 4441265-4441417

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T12C9.3a.1 4441103 4453151 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

25 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon47641   315   II: 4441103-4441417 Caenorhabditis elegans
Exon47645   189   II: 4441604-4441792 Caenorhabditis elegans
Exon47650   255   II: 4442091-4442345 Caenorhabditis elegans
Exon47654   104   II: 4442390-4442493 Caenorhabditis elegans
Exon47658   161   II: 4442951-4443111 Caenorhabditis elegans
Exon47664   354   II: 4444645-4444998 Caenorhabditis elegans
Exon47668   116   II: 4445494-4445609 Caenorhabditis elegans
Exon47674   356   II: 4445978-4446333 Caenorhabditis elegans
Exon47680   125   II: 4446505-4446629 Caenorhabditis elegans
Exon47686   213   II: 4447055-4447267 Caenorhabditis elegans
Exon47690   140   II: 4447514-4447653 Caenorhabditis elegans
Exon47696   728   II: 4448630-4449357 Caenorhabditis elegans
Exon47702   112   II: 4449899-4450010 Caenorhabditis elegans
Exon47708   109   II: 4450061-4450169 Caenorhabditis elegans
Exon47714   135   II: 4450362-4450496 Caenorhabditis elegans
Exon47721   206   II: 4450757-4450962 Caenorhabditis elegans
Exon47727   112   II: 4451015-4451126 Caenorhabditis elegans
Exon47733   55   II: 4451343-4451397 Caenorhabditis elegans
Exon47739   73   II: 4451452-4451524 Caenorhabditis elegans
Exon47745   227   II: 4451639-4451865 Caenorhabditis elegans
Exon47751   188   II: 4452139-4452326 Caenorhabditis elegans
Exon47757   96   II: 4452373-4452468 Caenorhabditis elegans
Exon47763   88   II: 4452581-4452668 Caenorhabditis elegans
Exon47769   241   II: 4452723-4452963 Caenorhabditis elegans
Exon47775   24   II: 4453128-4453151 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T12C9.3a.1 4441103 4453151 -1

1 Sequence

Length
4722

1 Sequence Ontology Term

Identifier Name Description
transcript