WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T12C9.3b.1 Sequence Name  T12C9.3b.1
Length (nt)  3909   Chromosome Location  II: 4441265-4453151
Chromosome . Primary Identifier  II Chromosome Location . Start  4441265
Chromosome Location . End  4453151 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T12C9.3b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006657 twk-2 T12C9.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T12C9.3b T12C9.3b 3909   II: 4441265-4441417

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T12C9.3b.1 4441265 4453151 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

25 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon47642   153   II: 4441265-4441417 Caenorhabditis elegans
Exon47646   189   II: 4441604-4441792 Caenorhabditis elegans
Exon47651   255   II: 4442091-4442345 Caenorhabditis elegans
Exon47655   104   II: 4442390-4442493 Caenorhabditis elegans
Exon47659   161   II: 4442951-4443111 Caenorhabditis elegans
Exon47665   354   II: 4444645-4444998 Caenorhabditis elegans
Exon47669   116   II: 4445494-4445609 Caenorhabditis elegans
Exon47675   356   II: 4445978-4446333 Caenorhabditis elegans
Exon47681   125   II: 4446505-4446629 Caenorhabditis elegans
Exon47687   213   II: 4447055-4447267 Caenorhabditis elegans
Exon47691   140   II: 4447514-4447653 Caenorhabditis elegans
Exon47699   77   II: 4449281-4449357 Caenorhabditis elegans
Exon47703   112   II: 4449899-4450010 Caenorhabditis elegans
Exon47709   109   II: 4450061-4450169 Caenorhabditis elegans
Exon47715   135   II: 4450362-4450496 Caenorhabditis elegans
Exon47722   206   II: 4450757-4450962 Caenorhabditis elegans
Exon47728   112   II: 4451015-4451126 Caenorhabditis elegans
Exon47734   55   II: 4451343-4451397 Caenorhabditis elegans
Exon47740   73   II: 4451452-4451524 Caenorhabditis elegans
Exon47746   227   II: 4451639-4451865 Caenorhabditis elegans
Exon47752   188   II: 4452139-4452326 Caenorhabditis elegans
Exon47758   96   II: 4452373-4452468 Caenorhabditis elegans
Exon47764   88   II: 4452581-4452668 Caenorhabditis elegans
Exon47770   241   II: 4452723-4452963 Caenorhabditis elegans
Exon47776   24   II: 4453128-4453151 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T12C9.3b.1 4441265 4453151 -1

1 Sequence

Length
3909

1 Sequence Ontology Term

Identifier Name Description
transcript