WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T12C9.3d.1 Sequence Name  T12C9.3d.1
Length (nt)  4347   Chromosome Location  II: 4441265-4453151
Chromosome . Primary Identifier  II Chromosome Location . Start  4441265
Chromosome Location . End  4453151 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T12C9.3d.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006657 twk-2 T12C9.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T12C9.3d T12C9.3d 4347   II: 4441265-4441417

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T12C9.3d.1 4441265 4453151 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

24 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon47644   153   II: 4441265-4441417 Caenorhabditis elegans
Exon47648   189   II: 4441604-4441792 Caenorhabditis elegans
Exon47653   255   II: 4442091-4442345 Caenorhabditis elegans
Exon47657   104   II: 4442390-4442493 Caenorhabditis elegans
Exon47661   161   II: 4442951-4443111 Caenorhabditis elegans
Exon47667   354   II: 4444645-4444998 Caenorhabditis elegans
Exon47671   116   II: 4445494-4445609 Caenorhabditis elegans
Exon47677   356   II: 4445978-4446333 Caenorhabditis elegans
Exon47683   125   II: 4446505-4446629 Caenorhabditis elegans
Exon47693   140   II: 4447514-4447653 Caenorhabditis elegans
Exon47697   728   II: 4448630-4449357 Caenorhabditis elegans
Exon47705   112   II: 4449899-4450010 Caenorhabditis elegans
Exon47711   109   II: 4450061-4450169 Caenorhabditis elegans
Exon47717   135   II: 4450362-4450496 Caenorhabditis elegans
Exon47724   206   II: 4450757-4450962 Caenorhabditis elegans
Exon47730   112   II: 4451015-4451126 Caenorhabditis elegans
Exon47736   55   II: 4451343-4451397 Caenorhabditis elegans
Exon47742   73   II: 4451452-4451524 Caenorhabditis elegans
Exon47748   227   II: 4451639-4451865 Caenorhabditis elegans
Exon47754   188   II: 4452139-4452326 Caenorhabditis elegans
Exon47760   96   II: 4452373-4452468 Caenorhabditis elegans
Exon47766   88   II: 4452581-4452668 Caenorhabditis elegans
Exon47772   241   II: 4452723-4452963 Caenorhabditis elegans
Exon47778   24   II: 4453128-4453151 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T12C9.3d.1 4441265 4453151 -1

1 Sequence

Length
4347

1 Sequence Ontology Term

Identifier Name Description
transcript