WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00200821 Gene Name  T12C9.8
Sequence Name  ? T12C9.8 Organism  Caenorhabditis elegans
Automated Description  Enriched in sensory neurons based on RNA-seq studies. Biotype  SO:0001263
Genetic Position  :± Length (nt)  ? 69
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
WBGene00200821

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:T12C9.8 T12C9.8 69   II: 4455032-4455100
 

Other

0 CDSs

0 RNAi Result

4 Allele

Public Name
gk963801
gk963053
WBVar01370979
WBVar01959915

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
WBGene00200821 4455032 4455100 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

1 Downstream Intergenic Region

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
intergenic_region_chrII_4455101..4458257   3157 II: 4455101-4458257 Caenorhabditis elegans

1 Expression Clusters

Regulated By Treatment Description Algorithm Primary Identifier
  Transcripts that showed significantly increased expression in sensory neuron (labeled by iaIs25[Pgcy-37::GFP + unc-119(+)]) comparing to in whole worm. Fold change > 2, p-value < 0.05. WBPaper00060661:sensory-neuron_enriched

0 Expression Patterns

0 GO Annotation

0 Homologues

1 Locations


Feature . Primary Identifier 		Start End Strand
WBGene00200821 4455032 4455100 1

0 Ontology Annotations

0 Regulates Expr Cluster

1 Sequence

Length
69

1 Sequence Ontology Term