WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T12C9.7c.1 Sequence Name  T12C9.7c.1
Length (nt)  998   Chromosome Location  II: 4459164-4460389
Chromosome . Primary Identifier  II Chromosome Location . Start  4459164
Chromosome Location . End  4460389 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T12C9.7c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020461 T12C9.7 T12C9.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T12C9.7c T12C9.7c 918   II: 4459206-4459406

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T12C9.7c.1 4459164 4460389 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon47788   243   II: 4459164-4459406 Caenorhabditis elegans
Exon47793   76   II: 4459450-4459525 Caenorhabditis elegans
Exon47796   174   II: 4459567-4459740 Caenorhabditis elegans
Exon47799   290   II: 4459794-4460083 Caenorhabditis elegans
Exon47802   138   II: 4460130-4460267 Caenorhabditis elegans
Exon47803   77   II: 4460313-4460389 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T12C9.7c.1 4459164 4460389 -1

1 Sequence

Length
998

1 Sequence Ontology Term

Identifier Name Description
transcript