WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T05C1.4b.1 Sequence Name  T05C1.4b.1
Length (nt)  3740   Chromosome Location  II: 4491152-4505147
Chromosome . Primary Identifier  II Chromosome Location . Start  4491152
Chromosome Location . End  4505147 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T05C1.4b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020251 camt-1 T05C1.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T05C1.4b T05C1.4b 3492   II: 4491400-4491504

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T05C1.4b.1 4491152 4505147 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

17 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon47841   353   II: 4491152-4491504 Caenorhabditis elegans
Exon47845   103   II: 4491677-4491779 Caenorhabditis elegans
Exon47849   224   II: 4492205-4492428 Caenorhabditis elegans
Exon47853   215   II: 4492611-4492825 Caenorhabditis elegans
Exon47857   83   II: 4500098-4500180 Caenorhabditis elegans
Exon47859   77   II: 4500492-4500568 Caenorhabditis elegans
Exon47861   79   II: 4500666-4500744 Caenorhabditis elegans
Exon47863   598   II: 4501005-4501602 Caenorhabditis elegans
Exon47865   409   II: 4501712-4502120 Caenorhabditis elegans
Exon47867   138   II: 4502170-4502307 Caenorhabditis elegans
Exon47869   542   II: 4502383-4502924 Caenorhabditis elegans
Exon47871   228   II: 4503194-4503421 Caenorhabditis elegans
Exon47873   145   II: 4503467-4503611 Caenorhabditis elegans
Exon47875   199   II: 4503762-4503960 Caenorhabditis elegans
Exon47877   86   II: 4504136-4504221 Caenorhabditis elegans
Exon47879   102   II: 4504320-4504421 Caenorhabditis elegans
Exon47881   159   II: 4504989-4505147 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T05C1.4b.1 4491152 4505147 -1

1 Sequence

Length
3740

1 Sequence Ontology Term

Identifier Name Description
transcript