WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:M03A1.3.1 Sequence Name  M03A1.3.1
Length (nt)  1184   Chromosome Location  II: 4557787-4559696
Chromosome . Primary Identifier  II Chromosome Location . Start  4557787
Chromosome Location . End  4559696 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
M03A1.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019746 M03A1.3 M03A1.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:M03A1.3 M03A1.3 1059   II: 4557789-4557983

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:M03A1.3.1 4557787 4559696 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon47968   197   II: 4557787-4557983 Caenorhabditis elegans
Exon47969   87   II: 4558030-4558116 Caenorhabditis elegans
Exon47970   243   II: 4558161-4558403 Caenorhabditis elegans
Exon47971   188   II: 4558472-4558659 Caenorhabditis elegans
Exon47972   241   II: 4558707-4558947 Caenorhabditis elegans
Exon47973   228   II: 4559469-4559696 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:M03A1.3.1 4557787 4559696 1

1 Sequence

Length
1184

1 Sequence Ontology Term

Identifier Name Description
transcript