WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:M03A1.6b.3 Sequence Name  M03A1.6b.3
Length (nt)  3016   Chromosome Location  II: 4590941-4599008
Chromosome . Primary Identifier  II Chromosome Location . Start  4590941
Chromosome Location . End  4599008 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
M03A1.6b.3

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019747 ipla-1 M03A1.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:M03A1.6b M03A1.6b 2262   II: 4591461-4591604

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:M03A1.6b.3 4590941 4599008 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon48000   664   II: 4590941-4591604 Caenorhabditis elegans
Exon48010   1011   II: 4592489-4593499 Caenorhabditis elegans
Exon48019   214   II: 4593546-4593759 Caenorhabditis elegans
Exon48028   244   II: 4594301-4594544 Caenorhabditis elegans
Exon48038   484   II: 4595099-4595582 Caenorhabditis elegans
Exon48046   117   II: 4597717-4597833 Caenorhabditis elegans
Exon48053   75   II: 4597915-4597989 Caenorhabditis elegans
Exon48059   207   II: 4598802-4599008 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:M03A1.6b.3 4590941 4599008 -1

1 Sequence

Length
3016

1 Sequence Ontology Term

Identifier Name Description
transcript