WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F35D11.2a.1 Sequence Name  F35D11.2a.1
Length (nt)  1745   Chromosome Location  II: 4623825-4626107
Chromosome . Primary Identifier  II Chromosome Location . Start  4623825
Chromosome Location . End  4626107 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F35D11.2a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004122 pqn-35 F35D11.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F35D11.2a F35D11.2a 1512   II: 4623843-4624023

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F35D11.2a.1 4623825 4626107 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon48107   199   II: 4623825-4624023 Caenorhabditis elegans
Exon48108   193   II: 4624263-4624455 Caenorhabditis elegans
Exon48112   316   II: 4624577-4624892 Caenorhabditis elegans
Exon48116   95   II: 4624945-4625039 Caenorhabditis elegans
Exon48120   54   II: 4625096-4625149 Caenorhabditis elegans
Exon48127   888   II: 4625220-4626107 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F35D11.2a.1 4623825 4626107 1

1 Sequence

Length
1745

1 Sequence Ontology Term

Identifier Name Description
transcript