WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F35D11.11a.1 Sequence Name  F35D11.11a.1
Length (nt)  6230   Chromosome Location  II: 4628858-4638341
Chromosome . Primary Identifier  II Chromosome Location . Start  4628858
Chromosome Location . End  4638341 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F35D11.11a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018051 che-10 F35D11.11 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F35D11.11a F35D11.11a 5655   II: 4629433-4629618

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F35D11.11a.1 4628858 4638341 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

15 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon48138   761   II: 4628858-4629618 Caenorhabditis elegans
Exon48142   246   II: 4629797-4630042 Caenorhabditis elegans
Exon48146   944   II: 4630103-4631046 Caenorhabditis elegans
Exon48150   360   II: 4631095-4631454 Caenorhabditis elegans
Exon48154   134   II: 4631501-4631634 Caenorhabditis elegans
Exon48158   215   II: 4631827-4632041 Caenorhabditis elegans
Exon48162   792   II: 4632089-4632880 Caenorhabditis elegans
Exon48167   1649   II: 4632929-4634577 Caenorhabditis elegans
Exon48170   148   II: 4635332-4635479 Caenorhabditis elegans
Exon48173   96   II: 4635551-4635646 Caenorhabditis elegans
Exon48176   108   II: 4636068-4636175 Caenorhabditis elegans
Exon48179   78   II: 4636493-4636570 Caenorhabditis elegans
Exon48182   166   II: 4637183-4637348 Caenorhabditis elegans
Exon48185   401   II: 4637403-4637803 Caenorhabditis elegans
Exon48188   132   II: 4638210-4638341 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F35D11.11a.1 4628858 4638341 -1

1 Sequence

Length
6230

1 Sequence Ontology Term

Identifier Name Description
transcript