WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T05A7.11.1 Sequence Name  T05A7.11.1
Length (nt)  1621   Chromosome Location  II: 4663622-4665459
Chromosome . Primary Identifier  II Chromosome Location . Start  4663622
Chromosome Location . End  4665459 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T05A7.11.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00044383 T05A7.11 T05A7.11 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T05A7.11 T05A7.11 1392   II: 4663837-4664674

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T05A7.11.1 4663622 4665459 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon48229   1053   II: 4663622-4664674 Caenorhabditis elegans
Exon48230   166   II: 4664724-4664889 Caenorhabditis elegans
Exon48231   125   II: 4664954-4665078 Caenorhabditis elegans
Exon48232   167   II: 4665128-4665294 Caenorhabditis elegans
Exon48233   110   II: 4665350-4665459 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T05A7.11.1 4663622 4665459 -1

1 Sequence

Length
1621

1 Sequence Ontology Term

Identifier Name Description
transcript