WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T05A7.2.1 Sequence Name  T05A7.2.1
Length (nt)  2695   Chromosome Location  II: 4673060-4676285
Chromosome . Primary Identifier  II Chromosome Location . Start  4673060
Chromosome Location . End  4676285 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T05A7.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020220 clec-140 T05A7.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T05A7.2 T05A7.2 726   II: 4674473-4674670

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T05A7.2.1 4673060 4676285 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon48249   1611   II: 4673060-4674670 Caenorhabditis elegans
Exon48252   277   II: 4674737-4675013 Caenorhabditis elegans
Exon48253   807   II: 4675479-4676285 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T05A7.2.1 4673060 4676285 1

1 Sequence

Length
2695

1 Sequence Ontology Term

Identifier Name Description
transcript