WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:T05A7.8 Sequence Name  T05A7.8
Length (nt)  1092   Chromosome Location  II: 4681764-4681956
Chromosome . Primary Identifier  II Chromosome Location . Start  4681764
Chromosome Location . End  4681956
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T05A7.8

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE38099 SRE-40 42.5 363 Caenorhabditis elegans
 

Other

2 RNAi

WormBase ID
WBRNAi00052451
WBRNAi00018189

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:T05A7.8 4681764 4681956 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020225 sre-40 T05A7.8 Caenorhabditis elegans

6 Locations


Feature . Primary Identifier
Start End Strand
CDS:T05A7.8 4681764 4681956 -1
CDS:T05A7.8 4682266 4682399 -1
CDS:T05A7.8 4682448 4682573 -1
CDS:T05A7.8 4682618 4682774 -1
CDS:T05A7.8 4682921 4683107 -1
CDS:T05A7.8 4683434 4683728 -1

1 Sequence

Length
1092

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:T05A7.8.1 T05A7.8.1 1206   II: 4681715-4683793