WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F10G7.7.1 Sequence Name  F10G7.7.1
Length (nt)  1083   Chromosome Location  II: 4687241-4689392
Chromosome . Primary Identifier  II Chromosome Location . Start  4687241
Chromosome Location . End  4689392 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F10G7.7.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017371 sre-39 F10G7.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F10G7.7 F10G7.7 1083   II: 4687241-4687529

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F10G7.7.1 4687241 4689392 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon48272   289   II: 4687241-4687529 Caenorhabditis elegans
Exon48273   178   II: 4687580-4687757 Caenorhabditis elegans
Exon48274   157   II: 4688294-4688450 Caenorhabditis elegans
Exon48275   260   II: 4688493-4688752 Caenorhabditis elegans
Exon48276   199   II: 4689194-4689392 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F10G7.7.1 4687241 4689392 1

1 Sequence

Length
1083

1 Sequence Ontology Term

Identifier Name Description
transcript