WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F10G7.8 Sequence Name  F10G7.8
Length (nt)  1473   Chromosome Location  II: 4696598-4696909
Chromosome . Primary Identifier  II Chromosome Location . Start  4696598
Chromosome Location . End  4696909
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F10G7.8

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE02632 RPN-5 56.4 490 Caenorhabditis elegans
 

Other

11 RNAi

WormBase ID
WBRNAi00108314
WBRNAi00073014
WBRNAi00073016
WBRNAi00013092
WBRNAi00076293
WBRNAi00044320
WBRNAi00033409
WBRNAi00073015
WBRNAi00022813
WBRNAi00106652
WBRNAi00106722

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F10G7.8 4696598 4696909 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004461 rpn-5 F10G7.8 Caenorhabditis elegans

5 Locations


Feature . Primary Identifier
Start End Strand
CDS:F10G7.8 4696598 4696909 -1
CDS:F10G7.8 4696977 4697153 -1
CDS:F10G7.8 4697201 4697908 -1
CDS:F10G7.8 4697960 4698145 -1
CDS:F10G7.8 4698203 4698292 -1

1 Sequence

Length
1473

1 Sequence Ontology Term

Identifier Name Description
CDS  

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F10G7.8.2 F10G7.8.2 1711   II: 4696418-4698427
Transcript:F10G7.8.1 F10G7.8.1 1652   II: 4696421-4698294