WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F10G7.4.1 Sequence Name  F10G7.4.1
Length (nt)  2135   Chromosome Location  II: 4698721-4700994
Chromosome . Primary Identifier  II Chromosome Location . Start  4698721
Chromosome Location . End  4700994 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F10G7.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004737 scc-1 F10G7.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F10G7.4 F10G7.4 1938   II: 4698721-4698972

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F10G7.4.1 4698721 4700994 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon48318   252   II: 4698721-4698972 Caenorhabditis elegans
Exon48319   150   II: 4699019-4699168 Caenorhabditis elegans
Exon48320   1101   II: 4699217-4700317 Caenorhabditis elegans
Exon48321   632   II: 4700363-4700994 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F10G7.4.1 4698721 4700994 1

1 Sequence

Length
2135

1 Sequence Ontology Term

Identifier Name Description
transcript