WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F10G7.9a.1 Sequence Name  F10G7.9a.1
Length (nt)  2440   Chromosome Location  II: 4703254-4706388
Chromosome . Primary Identifier  II Chromosome Location . Start  4703254
Chromosome Location . End  4706388 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F10G7.9a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017372 F10G7.9 F10G7.9 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F10G7.9a F10G7.9a 2184   II: 4703484-4703626

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F10G7.9a.1 4703254 4706388 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon48326   373   II: 4703254-4703626 Caenorhabditis elegans
Exon48328   95   II: 4703757-4703851 Caenorhabditis elegans
Exon48330   132   II: 4703900-4704031 Caenorhabditis elegans
Exon48332   211   II: 4704084-4704294 Caenorhabditis elegans
Exon48334   215   II: 4704341-4704555 Caenorhabditis elegans
Exon48336   1040   II: 4704608-4705647 Caenorhabditis elegans
Exon48338   74   II: 4705696-4705769 Caenorhabditis elegans
Exon48340   84   II: 4705947-4706030 Caenorhabditis elegans
Exon48342   64   II: 4706079-4706142 Caenorhabditis elegans
Exon48344   82   II: 4706186-4706267 Caenorhabditis elegans
Exon48347   70   II: 4706319-4706388 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F10G7.9a.1 4703254 4706388 -1

1 Sequence

Length
2440

1 Sequence Ontology Term

Identifier Name Description
transcript