WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F41C3.8a.1 Sequence Name  F41C3.8a.1
Length (nt)  1015   Chromosome Location  II: 4716740-4718533
Chromosome . Primary Identifier  II Chromosome Location . Start  4716740
Chromosome Location . End  4718533 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F41C3.8a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018274 F41C3.8 F41C3.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F41C3.8a F41C3.8a 951   II: 4716740-4716816

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F41C3.8a.1 4716740 4718533 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon48373   77   II: 4716740-4716816 Caenorhabditis elegans
Exon48374   84   II: 4717115-4717198 Caenorhabditis elegans
Exon48376   293   II: 4717254-4717546 Caenorhabditis elegans
Exon48378   285   II: 4717601-4717885 Caenorhabditis elegans
Exon48380   119   II: 4718203-4718321 Caenorhabditis elegans
Exon48382   157   II: 4718377-4718533 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F41C3.8a.1 4716740 4718533 1

1 Sequence

Length
1015

1 Sequence Ontology Term

Identifier Name Description
transcript