WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F41C3.5.1 Sequence Name  F41C3.5.1
Length (nt)  1502   Chromosome Location  II: 4737648-4739802
Chromosome . Primary Identifier  II Chromosome Location . Start  4737648
Chromosome Location . End  4739802 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F41C3.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018271 ctsa-1.1 F41C3.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F41C3.5 F41C3.5 1410   II: 4737650-4737795

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F41C3.5.1 4737648 4739802 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon48449   148   II: 4737648-4737795 Caenorhabditis elegans
Exon48450   787   II: 4738063-4738849 Caenorhabditis elegans
Exon48451   140   II: 4739184-4739323 Caenorhabditis elegans
Exon48452   427   II: 4739376-4739802 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F41C3.5.1 4737648 4739802 1

1 Sequence

Length
1502

1 Sequence Ontology Term

Identifier Name Description
transcript