WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F26G1.6a.1 Sequence Name  F26G1.6a.1
Length (nt)  2774   Chromosome Location  II: 4775284-4781464
Chromosome . Primary Identifier  II Chromosome Location . Start  4775284
Chromosome Location . End  4781464 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F26G1.6a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017842 nep-12 F26G1.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F26G1.6a F26G1.6a 2319   II: 4775526-4775702

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F26G1.6a.1 4775284 4781464 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon48513   419   II: 4775284-4775702 Caenorhabditis elegans
Exon48515   416   II: 4775802-4776217 Caenorhabditis elegans
Exon48517   101   II: 4776273-4776373 Caenorhabditis elegans
Exon48519   114   II: 4776435-4776548 Caenorhabditis elegans
Exon48521   125   II: 4776597-4776721 Caenorhabditis elegans
Exon48523   105   II: 4776883-4776987 Caenorhabditis elegans
Exon48528   336   II: 4777942-4778277 Caenorhabditis elegans
Exon48530   195   II: 4778343-4778537 Caenorhabditis elegans
Exon48532   290   II: 4778581-4778870 Caenorhabditis elegans
Exon48534   276   II: 4779155-4779430 Caenorhabditis elegans
Exon48536   116   II: 4779531-4779646 Caenorhabditis elegans
Exon48539   281   II: 4781184-4781464 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F26G1.6a.1 4775284 4781464 -1

1 Sequence

Length
2774

1 Sequence Ontology Term

Identifier Name Description
transcript