WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F26G1.6b.1 Sequence Name  F26G1.6b.1
Length (nt)  2499   Chromosome Location  II: 4775526-4784536
Chromosome . Primary Identifier  II Chromosome Location . Start  4775526
Chromosome Location . End  4784536 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F26G1.6b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017842 nep-12 F26G1.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F26G1.6b F26G1.6b 2499   II: 4775526-4775702

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F26G1.6b.1 4775526 4784536 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon48514   177   II: 4775526-4775702 Caenorhabditis elegans
Exon48516   416   II: 4775802-4776217 Caenorhabditis elegans
Exon48518   101   II: 4776273-4776373 Caenorhabditis elegans
Exon48520   114   II: 4776435-4776548 Caenorhabditis elegans
Exon48522   125   II: 4776597-4776721 Caenorhabditis elegans
Exon48524   105   II: 4776883-4776987 Caenorhabditis elegans
Exon48529   336   II: 4777942-4778277 Caenorhabditis elegans
Exon48531   195   II: 4778343-4778537 Caenorhabditis elegans
Exon48533   290   II: 4778581-4778870 Caenorhabditis elegans
Exon48535   276   II: 4779155-4779430 Caenorhabditis elegans
Exon48537   116   II: 4779531-4779646 Caenorhabditis elegans
Exon48540   81   II: 4782843-4782923 Caenorhabditis elegans
Exon48541   54   II: 4783004-4783057 Caenorhabditis elegans
Exon48543   113   II: 4784424-4784536 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F26G1.6b.1 4775526 4784536 -1

1 Sequence

Length
2499

1 Sequence Ontology Term

Identifier Name Description
transcript