WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C33F10.2.1 Sequence Name  C33F10.2.1
Length (nt)  2644   Chromosome Location  II: 4828559-4832472
Chromosome . Primary Identifier  II Chromosome Location . Start  4828559
Chromosome Location . End  4832472 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C33F10.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016352 tbck-1 C33F10.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C33F10.2 C33F10.2 2520   II: 4828560-4828672

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C33F10.2.1 4828559 4832472 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon48622   114   II: 4828559-4828672 Caenorhabditis elegans
Exon48623   71   II: 4828720-4828790 Caenorhabditis elegans
Exon48624   238   II: 4828838-4829075 Caenorhabditis elegans
Exon48625   157   II: 4829121-4829277 Caenorhabditis elegans
Exon48626   159   II: 4829325-4829483 Caenorhabditis elegans
Exon48627   414   II: 4829543-4829956 Caenorhabditis elegans
Exon48628   214   II: 4830007-4830220 Caenorhabditis elegans
Exon48629   273   II: 4830553-4830825 Caenorhabditis elegans
Exon48630   84   II: 4830871-4830954 Caenorhabditis elegans
Exon48631   381   II: 4831461-4831841 Caenorhabditis elegans
Exon48632   160   II: 4831889-4832048 Caenorhabditis elegans
Exon48633   379   II: 4832094-4832472 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C33F10.2.1 4828559 4832472 1

1 Sequence

Length
2644

1 Sequence Ontology Term

Identifier Name Description
transcript