WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:R05F9.10 Sequence Name  R05F9.10
Length (nt)  1014   Chromosome Location  II: 4902596-4902763
Chromosome . Primary Identifier  II Chromosome Location . Start  4902596
Chromosome Location . End  4902763
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R05F9.10

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE04813 SGT-1 36.4 337 Caenorhabditis elegans
 

Other

22 RNAi

WormBase ID
WBRNAi00051309
WBRNAi00106366
WBRNAi00062667
WBRNAi00034617
WBRNAi00017452
WBRNAi00074603
WBRNAi00074602
WBRNAi00074605
WBRNAi00074604
WBRNAi00074606
WBRNAi00079543
WBRNAi00079681
WBRNAi00079727
WBRNAi00079819
WBRNAi00079497
WBRNAi00079589
WBRNAi00079635
WBRNAi00079773
WBRNAi00074607
WBRNAi00074608
WBRNAi00072277
WBRNAi00112129

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:R05F9.10 4902596 4902763 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019893 sgt-1 R05F9.10 Caenorhabditis elegans

3 Locations


Feature . Primary Identifier
Start End Strand
CDS:R05F9.10 4902596 4902763 -1
CDS:R05F9.10 4902895 4903583 -1
CDS:R05F9.10 4903637 4903793 -1

1 Sequence

Length
1014

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:R05F9.10.1 R05F9.10.1 1325   II: 4902288-4903796