WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZK546.2b.2 Sequence Name  ZK546.2b.2
Length (nt)  1068   Chromosome Location  II: 4946573-4948071
Chromosome . Primary Identifier  II Chromosome Location . Start  4946573
Chromosome Location . End  4948071 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZK546.2b.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022759 ZK546.2 ZK546.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZK546.2b ZK546.2b 786   II: 4947073-4947130

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZK546.2b.2 4946573 4948071 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon48831   45   II: 4946573-4946617 Caenorhabditis elegans
Exon48832   107   II: 4946634-4946740 Caenorhabditis elegans
Exon48833   68   II: 4947063-4947130 Caenorhabditis elegans
Exon48838   455   II: 4947176-4947630 Caenorhabditis elegans
Exon48843   393   II: 4947679-4948071 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZK546.2b.2 4946573 4948071 1

1 Sequence

Length
1068

1 Sequence Ontology Term

Identifier Name Description
transcript