WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:ZK546.1d Sequence Name  ZK546.1d
Length (nt)  2202   Chromosome Location  II: 4949911-4950069
Chromosome . Primary Identifier  II Chromosome Location . Start  4949911
Chromosome Location . End  4950069
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZK546.1d

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE39461 ZYG-12, isoform d 83.9 733 Caenorhabditis elegans
 

Other

4 RNAi

WormBase ID
WBRNAi00009474
WBRNAi00059501
WBRNAi00038328
WBRNAi00027075

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
CDS:ZK546.1d 4949911 4950069 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006997 zyg-12 ZK546.1 Caenorhabditis elegans

8 Locations


Feature . Primary Identifier 		Start End Strand
CDS:ZK546.1d 4949911 4950069 1
CDS:ZK546.1d 4950118 4950206 1
CDS:ZK546.1d 4950257 4951437 1
CDS:ZK546.1d 4951484 4951547 1
CDS:ZK546.1d 4951601 4952009 1
CDS:ZK546.1d 4952060 4952239 1
CDS:ZK546.1d 4952283 4952392 1
CDS:ZK546.1d 4952490 4952499 1

1 Sequence

Length
2202

1 Sequence Ontology Term

Identifier Name Description
CDS  

3 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:ZK546.1d.3 ZK546.1d.3 3197   II: 4949900-4953483
Transcript:ZK546.1d.1 ZK546.1d.1 2891   II: 4949900-4953485
Transcript:ZK546.1d.2 ZK546.1d.2 2577   II: 4949900-4953492