WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y38A8.3c.1 Sequence Name  Y38A8.3c.1
Length (nt)  1005   Chromosome Location  II: 4956006-4957111
Chromosome . Primary Identifier  II Chromosome Location . Start  4956006
Chromosome Location . End  4957111 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y38A8.3c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006737 ulp-2 Y38A8.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y38A8.3c Y38A8.3c 1005   II: 4956006-4956392

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y38A8.3c.1 4956006 4957111 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon48928   387   II: 4956006-4956392 Caenorhabditis elegans
Exon48931   571   II: 4956443-4957013 Caenorhabditis elegans
Exon48932   47   II: 4957065-4957111 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y38A8.3c.1 4956006 4957111 -1

1 Sequence

Length
1005

1 Sequence Ontology Term

Identifier Name Description
transcript