WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:T27F7.3 Sequence Name  T27F7.3
Length (nt)  330   Chromosome Location  II: 4991054-4991098
Chromosome . Primary Identifier  II Chromosome Location . Start  4991054
Chromosome Location . End  4991098
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T27F7.3

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE27214 EIF-1 12.4 109 Caenorhabditis elegans
 

Other

49 RNAi

WormBase ID
WBRNAi00094313
WBRNAi00026423
WBRNAi00009230
WBRNAi00085581
WBRNAi00054349
WBRNAi00036053
WBRNAi00066301
WBRNAi00094043
WBRNAi00094234
WBRNAi00088168
WBRNAi00088291
WBRNAi00110191
WBRNAi00088474
WBRNAi00088479
WBRNAi00088484
WBRNAi00088488
WBRNAi00088498
WBRNAi00066169
WBRNAi00088478
WBRNAi00088485
WBRNAi00066252
WBRNAi00088491
WBRNAi00088495
WBRNAi00096911
WBRNAi00089298
WBRNAi00088467
WBRNAi00089474
WBRNAi00088469
WBRNAi00089482
WBRNAi00088512

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:T27F7.3 4991054 4991098 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020868 eif-1 T27F7.3 Caenorhabditis elegans

5 Locations


Feature . Primary Identifier
Start End Strand
CDS:T27F7.3 4991054 4991098 -1
CDS:T27F7.3 4991341 4991442 -1
CDS:T27F7.3 4993273 4993322 -1
CDS:T27F7.3 4993369 4993470 -1
CDS:T27F7.3 4993521 4993551 -1

1 Sequence

Length
330

1 Sequence Ontology Term

Identifier Name Description
CDS  

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:T27F7.3.1 T27F7.3.1 582   II: 4990831-4993580
Transcript:T27F7.3.2 T27F7.3.2 579   II: 4990834-4993580