WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:T27F7.1 Sequence Name  T27F7.1
Length (nt)  627   Chromosome Location  II: 4994220-4994429
Chromosome . Primary Identifier  II Chromosome Location . Start  4994220
Chromosome Location . End  4994429
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T27F7.1

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE27211 VPS-24 23.6 208 Caenorhabditis elegans
 

Other

30 RNAi

WormBase ID
WBRNAi00070460
WBRNAi00067261
WBRNAi00067277
WBRNAi00067434
WBRNAi00067831
WBRNAi00067836
WBRNAi00067839
WBRNAi00068124
WBRNAi00068199
WBRNAi00068203
WBRNAi00068207
WBRNAi00068210
WBRNAi00009229
WBRNAi00025766
WBRNAi00026422
WBRNAi00027380
WBRNAi00016055
WBRNAi00090873
WBRNAi00091179
WBRNAi00091178
WBRNAi00076722
WBRNAi00078467
WBRNAi00054346
WBRNAi00023331
WBRNAi00023619
WBRNAi00023844
WBRNAi00024132
WBRNAi00070458
WBRNAi00070457
WBRNAi00070459

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:T27F7.1 4994220 4994429 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020866 vps-24 T27F7.1 Caenorhabditis elegans

4 Locations


Feature . Primary Identifier
Start End Strand
CDS:T27F7.1 4994220 4994429 1
CDS:T27F7.1 4994473 4994613 1
CDS:T27F7.1 4994663 4994788 1
CDS:T27F7.1 4995327 4995476 1

1 Sequence

Length
627

1 Sequence Ontology Term

Identifier Name Description
CDS  

3 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:T27F7.1.2 T27F7.1.2 885   II: 4993998-4995611
Transcript:T27F7.1.3 T27F7.1.3 840   II: 4994039-4995607
Transcript:T27F7.1.1 T27F7.1.1 761   II: 4994217-4995607