WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F59A6.4.1 Sequence Name  F59A6.4.1
Length (nt)  2410   Chromosome Location  II: 5005081-5008077
Chromosome . Primary Identifier  II Chromosome Location . Start  5005081
Chromosome Location . End  5008077 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F59A6.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019086 F59A6.4 F59A6.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F59A6.4 F59A6.4 2289   II: 5005137-5005265

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F59A6.4.1 5005081 5008077 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon49090   185   II: 5005081-5005265 Caenorhabditis elegans
Exon49091   309   II: 5005440-5005748 Caenorhabditis elegans
Exon49092   562   II: 5005799-5006360 Caenorhabditis elegans
Exon49093   200   II: 5006454-5006653 Caenorhabditis elegans
Exon49094   128   II: 5006701-5006828 Caenorhabditis elegans
Exon49095   247   II: 5006935-5007181 Caenorhabditis elegans
Exon49096   469   II: 5007239-5007707 Caenorhabditis elegans
Exon49097   310   II: 5007768-5008077 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F59A6.4.1 5005081 5008077 1

1 Sequence

Length
2410

1 Sequence Ontology Term

Identifier Name Description
transcript