WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F59A6.1b Sequence Name  F59A6.1b
Length (nt)  4446   Chromosome Location  II: 5022956-5022967
Chromosome . Primary Identifier  II Chromosome Location . Start  5022956
Chromosome Location . End  5022967
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F59A6.1b

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE50862 NSY-1, isoform b 167.5 1481 Caenorhabditis elegans
 

Other

25 RNAi

WormBase ID
WBRNAi00113207
WBRNAi00046221
WBRNAi00049111
WBRNAi00022388
WBRNAi00113160
WBRNAi00086736
WBRNAi00086738
WBRNAi00112977
WBRNAi00110864
WBRNAi00113107
WBRNAi00088703
WBRNAi00108306
WBRNAi00075832
WBRNAi00098019
WBRNAi00097052
WBRNAi00077206
WBRNAi00088596
WBRNAi00077212
WBRNAi00078849
WBRNAi00113962
WBRNAi00077214
WBRNAi00097059
WBRNAi00095257
WBRNAi00094589
WBRNAi00094596

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F59A6.1b 5022956 5022967 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003822 nsy-1 F59A6.1 Caenorhabditis elegans

10 Locations


Feature . Primary Identifier
Start End Strand
CDS:F59A6.1b 5022956 5022967 1
CDS:F59A6.1b 5023694 5023936 1
CDS:F59A6.1b 5024164 5024451 1
CDS:F59A6.1b 5024499 5024893 1
CDS:F59A6.1b 5024943 5025061 1
CDS:F59A6.1b 5025501 5026278 1
CDS:F59A6.1b 5026325 5027239 1
CDS:F59A6.1b 5027564 5028335 1
CDS:F59A6.1b 5028398 5029143 1
CDS:F59A6.1b 5029415 5029592 1

1 Sequence

Length
4446

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F59A6.1b.1 F59A6.1b.1 4832   II: 5022956-5029978