WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00023025 Gene Name  F33G12.t1
Sequence Name  ? F33G12.t1 Organism  Caenorhabditis elegans
Automated Description  Is affected by elli-1 and daf-2 based on microarray studies. Biotype  SO:0001272
Genetic Position  Length (nt)  ? 74
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
WBGene00023025

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F33G12.t1 F33G12.t1 74   II: 5032771-5032844
 

Other

0 CDSs

3 RNAi Result

WormBase ID
WBRNAi00014253
WBRNAi00031726
WBRNAi00062234

2 Allele

Public Name
gk963801
gk963053

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
WBGene00023025 5032771 5032844 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

0 Downstream Intergenic Region

2 Expression Clusters

Regulated By Treatment Description Algorithm Primary Identifier
  Transcripts that showed significantly increased expression in daf-2(e1370) comparing to in N2. Student's t-test, fold change > 2, p-value < 0.05. WBPaper00055386:daf-2(e1370)_upregulated
  Transcripts that showed significantly increased expression in elli-1(sam-3) comparing to in N2 animals, accordingto tiling array analysis. Fold change > 1.2, q-value < 0.05. WBPaper00050743:elli-1(sam-3)_upregulated

0 Expression Patterns

0 GO Annotation

0 Homologues

1 Locations


Feature . Primary Identifier
Start End Strand
WBGene00023025 5032771 5032844 1

0 Ontology Annotations

0 Regulates Expr Cluster

1 Sequence

Length
74

1 Sequence Ontology Term