WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F33G12.6b.1 Sequence Name  F33G12.6b.1
Length (nt)  2380   Chromosome Location  II: 5049922-5053719
Chromosome . Primary Identifier  II Chromosome Location . Start  5049922
Chromosome Location . End  5053719 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F33G12.6b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018018 F33G12.6 F33G12.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F33G12.6b F33G12.6b 2043   II: 5049922-5050008

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F33G12.6b.1 5049922 5053719 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon49166   87   II: 5049922-5050008 Caenorhabditis elegans
Exon49169   705   II: 5050429-5051133 Caenorhabditis elegans
Exon49171   710   II: 5051585-5052294 Caenorhabditis elegans
Exon49173   532   II: 5052523-5053054 Caenorhabditis elegans
Exon49174   145   II: 5053322-5053466 Caenorhabditis elegans
Exon49176   201   II: 5053519-5053719 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F33G12.6b.1 5049922 5053719 1

1 Sequence

Length
2380

1 Sequence Ontology Term

Identifier Name Description
transcript