WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C27A2.3.1 Sequence Name  C27A2.3.1
Length (nt)  885   Chromosome Location  II: 5054135-5055179
Chromosome . Primary Identifier  II Chromosome Location . Start  5054135
Chromosome Location . End  5055179 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C27A2.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002068 ify-1 C27A2.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C27A2.3 C27A2.3 735   II: 5054261-5054704

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C27A2.3.1 5054135 5055179 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon49178   570   II: 5054135-5054704 Caenorhabditis elegans
Exon49179   224   II: 5054815-5055038 Caenorhabditis elegans
Exon49180   91   II: 5055089-5055179 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C27A2.3.1 5054135 5055179 -1

1 Sequence

Length
885

1 Sequence Ontology Term

Identifier Name Description
transcript