WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C27A2.5.1 Sequence Name  C27A2.5.1
Length (nt)  671   Chromosome Location  II: 5068648-5069625
Chromosome . Primary Identifier  II Chromosome Location . Start  5068648
Chromosome Location . End  5069625 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C27A2.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016153 idpb-2 C27A2.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C27A2.5 C27A2.5 567   II: 5068735-5069029

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C27A2.5.1 5068648 5069625 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon49220   382   II: 5068648-5069029 Caenorhabditis elegans
Exon49221   215   II: 5069290-5069504 Caenorhabditis elegans
Exon49223   74   II: 5069552-5069625 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C27A2.5.1 5068648 5069625 -1

1 Sequence

Length
671

1 Sequence Ontology Term

Identifier Name Description
transcript