WormMine: Gene WBGene00197660

• WormBase Gene ID: WBGene00197660
• Gene Name: C27A2.11
• Sequence Name: C27A2.11
• Organism: Caenorhabditis elegans
• Automated Description: Is affected by hmg-3 and adr-1 based on RNA-seq studies.
• Biotype: SO:0001263
• Genetic Position: :±
• Length (nt): 299

1 Organism

• Name: Caenorhabditis elegans
• Taxon Id: 6239

1 Synonyms

• Value: WBGene00197660

Genomics

1 Transcripts

WormMine ID	Sequence Name	Length (nt)	Chromosome Location
Transcript:C27A2.11	C27A2.11	299	II: 5069360-5069658

Other

0 CDSs

0 RNAi Result

12 Allele

• gk963801
• gk963053
• WBVar02122919
• gk929023
• gk332041
• WBVar01437694
• WBVar02120939
• WBVar02124555
• gk142162
• WBVar02120624
• WBVar02123027
• gk962544

1 Chromosome

• WormBase ID: II
• Organism: Caenorhabditis elegans
• Length (nt): 15279421

1 Chromosome Location

• Feature . Primary Identifier: WBGene00197660
• Start: 5069360
• End: 5069658
• Strand: 1

2 Data Sets

• WormBaseAcedbConverter
• C. elegans genomic annotations (GFF3 Gene)

1 Downstream Intergenic Region

• WormBase ID: intergenic_region_chrII_5069659..5069759
• Length (nt): 101
• Chromosome Location: II: 5069659-5069759
• Organism: Caenorhabditis elegans

2 Expression Clusters

Regulated By Treatment	Description	Algorithm	Primary Identifier
	Transcripts that showed significantly decreased expression in BAT525 [hmg-3 (tm2539) / dpy-5(e61) unc-13(e1091) I.] comparing to in N2 at 1-day post L4 adult hermaphrodite stage	DESeq 2, fold change > 4, adjusted p-value < 0.05.	WBPaper00055013:hmg-3(bar24)_downregulated
	Transcripts that showed significantly decreased expression in adr-1(tm668) and adr-1(gv6) comparing to in N2 at L4 larva stage.	DESeq FDR <= 0.05	WBPaper00056617:adr-1_downregulated_L4_transcript

0 Expression Patterns

0 GO Annotation

0 Homologues

1 Locations

• Feature . Primary Identifier: WBGene00197660
• Start: 5069360
• End: 5069658
• Strand: 1

0 Ontology Annotations

0 Regulates Expr Cluster

1 Sequence

• Length: 299

1 Sequence Ontology Term