WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C27A2.7.1 Sequence Name  C27A2.7.1
Length (nt)  709   Chromosome Location  II: 5069760-5071365
Chromosome . Primary Identifier  II Chromosome Location . Start  5069760
Chromosome Location . End  5071365 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C27A2.7.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00044386 C27A2.7 C27A2.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C27A2.7 C27A2.7 609   II: 5069858-5069986

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C27A2.7.1 5069760 5071365 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon49224   227   II: 5069760-5069986 Caenorhabditis elegans
Exon49225   154   II: 5070364-5070517 Caenorhabditis elegans
Exon49226   74   II: 5070593-5070666 Caenorhabditis elegans
Exon49227   72   II: 5070808-5070879 Caenorhabditis elegans
Exon49228   182   II: 5071184-5071365 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C27A2.7.1 5069760 5071365 -1

1 Sequence

Length
709

1 Sequence Ontology Term

Identifier Name Description
transcript